Unfortunately, philosophers of science usually regard scientific realism and scientific anti-realism as monistic doctrines. The assumption is that there is one goal of all scientific inference - finding propositions that are true, or finding propositions that are predictively accurate. In fact, there are multiple goals. Sometimes realism is the right interpretation of a scientific problem, while at other times instrumentalism is.

Deism claims that God creates the universe and the laws of nature and then is hands-off, with everything that subsequently happens in nature being due to natural processes.

The indispensability argument seeks to assimilate the epistemology of metaphysical statements to the epistemology of statements that are obviously empirical. I think it fails to achieve this goal. The argument does not refute the Carnapian thesis that scientific theories and metaphysical claims differ epistemologically - observations can provide evidence for the former, but not for the latter.

The more evolutionary theory gets called an atheistic theory, the greater the risk that it will lose its place in public school biology courses in the United States. If the theory is thought of in this way, one should not be surprised if a judge at some point decides that teaching evolutionary theory violates the Constitutional principle of neutrality with respect to religion.

Group selection and individual selection are just two of the selection processes that have played important roles in evolution. There also is selection within individual organisms (intragenomic conflict), and selection among multi-species communities (an idea that now is getting attention in work on the human microbiome). All four of these levels of selection find a place in multi-level selection theory.

Darwin repeatedly used the hypothesis of common ancestry as a platform on which to build his various ideas about testing hypotheses concerning natural selection. He also argued that adaptive similarities provide little or no evidence for common ancestry. Although this second claim needs to be fine-tuned, Darwin was right that ample evidence for common ancestry can exist even if none of the characteristics we observe were caused to evolve by natural selection.

If the organisms in a species now have trait T, and this trait now helps those organisms to survive and reproduce because the trait has effect E, a natural hypothesis to consider is that T evolved in the lineage leading to those current organisms because T had effect E. This hypothesis is "natural," but it often isn't true!